This chapter provides an overview of the practical methodologies that can be used to identify and characterize the tandem repeats that are most frequently used as genetic markers in nematodes (including plant-parasitic and entomopathogenic nematodes), namely satellite DNA and microsatellites. The...

There are fundamental differences between the current levels of genomic and proteomic knowledge for bacteria and fungi. With multiple growth forms and over 100,000 known species, the fungi probably present a more complex situation, but genomic studies are hindered by the lack of reliable reference...

Microbial culture collections (CC) support taxonomy through the provision and preservation of microorganisms, underpinning the integrity of research. However, cultures are essentially worthless without associated data. Details of isolation (geographical location, date of collection, date of...

This chapter aims to give an overview of the basic knowledge, understanding and perspectives in fungal genomics. It is likely that fungal genome sequencing will soon become simpler and cheaper, and allow most research laboratories to undertake in-house, whole genome sequencing on a regular basis,...

This chapter provides information on germplasm resources and biodiversity, cytology, unreduced pollen grains, plant morphology, molecular markers, marker-assisted selection, genome size and genomics, breeding criteria, rootstocks, classical breeding, and breeding through biotechnology of...

This book with 12 chapters is divided into three parts, viz., genomics, genetic engineering, and commercialization. Part I (Chapters 1 to 5) is focused on describing genomic methods, their application to the characterization of woody perennials, and the results derived from these analyses. Chapter...

This chapter describes the major disciplinary areas of genomics that have been explored in and utilized for various tree species. It will serve as a foundation for the remaining chapters in Section I of this book.

This chapter focuses on characterizing conifer genomes, which offers opportunities for understanding aspects of plant biology that could not be studied otherwise.

This chapter discusses the genomics of hardwoods, which are non-coniferous woody perennial trees that belong to the plant division Angiospermae, also known as the flowering plants. Hardwoods include some of the most economically and ecologically important tree species worldwide, including those...

This chapter focuses on the use of genomic information to characterize forest tree population diversity, the relationship among populations, and the detection of loci that contribute to their adaptation. Other aspects related to population genetics of tree species, such as geographic variation,...